학제간연구 | Interdisciplinary Studies in Gambling | 跨学科研究
- date : 2015-05-20 01:10|hit : 1541
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- Article] Evaluation of Bamboo Genetic Diversity Using Morphological and SRAP Analyses(1)
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DocNo of ILP: 97
Doc. Type: Article
Title: Evaluation of Bamboo Genetic Diversity Using Morphological and SRAP Analyses(1)
Authors: Zhu, S; Liu, T; Tang, Q; Fu, L; Tang, S
Full Name of Authors: Zhu, S.; Liu, T.; Tang, Q.; Fu, L.; Tang, Sh
Keywords by Author:
Keywords Plus: FRAGMENT-LENGTH-POLYMORPHISMS; PHYLOGENETIC-RELATIONSHIPS; GERMPLASM COLLECTION; AFLP MARKERS; SSR MARKERS; BAMBUSOIDEAE; POPULATIONS; SUGARCANE; BRASSICA; POACEAE
Abstract: Bamboo is an important member of the giant grass subfamily Bambusoideae of Poaceae. In this study, 13 bamboo accessions belonging to 5 different genera were subjected to morphological evaluation and sequence-related amplified polymorphism (SRAP) analysis. Unweighted pair-group method of arithmetic averages (UPGMA) cluster analysis was used to construct a dendrogram and to estimate the genetic distances among accessions. On the basis of morphological characteristics, the 13 accessions were distinctly classified into 2 major clusters; 3 varieties, PPYX, PGNK, and PLYY were grouped as cluster A, and 10 accessions were categorized under cluster B. Similarity coefficients ranging from 0.23 to 0.96 indicated abundant genetic vari-ation among bamboo varieties. Approximately 38 SRAP primer combinations generated 186 bands, with 150 bands (80.65%) showing polymorphisms among the 13 accessions. Based on SRAP analysis, 13 bamboo accessions were grouped into 3 major clusters. Five species comprised Cluster I (PASL, PLYY, PTSC, SCNK, and BMAK), which belongs to genus Phyllostachys. Cluster II consisted of 5 varieties, PASL, PLYY, PTSC, SCNK, and BMAK; Cluster III included 3 varieties, PGNK, PLSY, and BMRS. Comparison of the results generated by morphological and SRAP analyses showed that the classification based on SRAP markers was more concordant to the taxonomic results of Gamble than that performed using morphological characters, thus suggesting that SRAP analysis is more efficient in evaluating genetic diversity in bamboos compared to morphological analysis. The SRAP technique serves as an alternative method in assessing genetic diversity within bamboo collections.
Cate of OECD: Biological sciences
Year of Publication: 2014
Business Area: gamble
Detail Business: gamble
Country: USA
Study Area:
Name of Journal: RUSSIAN JOURNAL OF GENETICS
Language: English
Country of Authors: [Zhu, S.] Chinese Acad Agr Sci, Inst Bast Fiber Crops, Changsha 410205, Hunan, Peoples R China; Chinese Acad Agr Sci, Ctr Southern Econ Crops, Changsha 410205, Hunan, Peoples R China
Press Adress: Zhu, S (reprint author), Chinese Acad Agr Sci, Inst Bast Fiber Crops, Changsha 410205, Hunan, Peoples R China.
Email Address: csec2012@163.com
Citaion:
Funding: Natural Science Foundation of Hunan Province [09JJ3082]
Lists of Citation: Ariss JJ, 2007, CROP SCI, V47, P2274, DOI 10.2135/cropsci2006.12.0782; Barkley NA, 2005, GENOME, V48, P731, DOI 10.1139/G05-022; Budak H, 2004, THEOR APPL GENET, V109, P280, DOI 10.1007/s00122-004-1630-z; Chang D, 2012, GENET MOL RES, V11, P1245, DOI 10.4238/2012.May.9.3; Das M, 2007, BIOL PLANTARUM, V51, P667, DOI 10.1007/s10535-007-0140-7; Ferriol M, 2004, CROP SCI, V44, P653; Ferriol M, 2003, THEOR APPL GENET, V107, P271, DOI 10.1007/s00122-003-1242-z; FRIAR E, 1994, THEOR APPL GENET, V89, P265, DOI 10.1007/BF00225152; FRIAR E, 1991, THEOR APPL GENET, V82, P697, DOI 10.1007/BF00227313; Gamble J.S., 1896, BAMBUSEAE BRIT INDIA; Gielis J., 1997, PHYLLOSTACHYS USING, P107; Guo DL, 2006, GENET RESOUR CROP EV, V53, P1597, DOI 10.1007/s10722-005-8717-5; Hao Q, 2008, HEREDITAS, V145, P38, DOI [10.1111/j.0018-0661.2008.2013.x, 10.1111/j.2008.0018-0661.02013.x]; He DH, 2005, EUPHYTICA, V144, P141, DOI 10.1007/s10681-005-5297-6; JANZEN DH, 1976, ANNU REV ECOL SYST, V7, P347, DOI 10.1146/annurev.es.07.110176.002023; Kochhar S., 1990, INDIAN J PLANT GENET, V3, P21; Lai CC, 1997, BOT BULL ACAD SINICA, V38, P145; Li G, 2001, THEOR APPL GENET, V103, P455, DOI 10.1007/s001220100570; Li G, 2003, THEOR APPL GENET, V107, P168, DOI 10.1007/s00122-003-1236-x; Lin Z.X., 2003, CHINESE SCI BULL, V48, P2064; Muhammad Y., 2011, MOL BIOTECHNOL, V47, P189; MURRAY MG, 1980, NUCLEIC ACIDS RES, V8, P4321, DOI 10.1093/nar/8.19.4321; Mutlu N, 2008, THEOR APPL GENET, V117, P1303, DOI 10.1007/s00122-008-0864-6; Nayak S, 2003, PLANT SOIL ENVIRON, V49, P24; NEI M, 1979, P NATL ACAD SCI USA, V76, P5269, DOI 10.1073/pnas.76.10.5269; Osman G., 2007, BIOL BRATISLAV, V62, P41; Raizada M. B., 1956, Indian Forester, V82, P215; Rohlf F.J, 2000, NTSYS PC NUMERICAL T; Sharma RK, 2008, GENOME, V51, P91, DOI [10.1139/g07-101, 10.1139/G07.101]; Sneath PH, 1973, NUMERICAL TAXONOMY P; Song ZQ, 2010, GENETICA, V138, P241, DOI 10.1007/s10709-009-9416-5; Trevor R.H., 2000, J PLANT RES, V113, P259; Uzun A, 2009, SCI HORTIC-AMSTERDAM, V121, P306, DOI 10.1016/j.scienta.2009.02.018; Wang D.J., 1987, GUATEMALA BAMBOOS CH; Wang G, 2005, SCI CHINA SER C, V48, P213, DOI 10.1360/062004-11; Wu C.Y., 1962, BOT B ACAD SIN, V3, P83; Wu G.Y., 1999, PROTOCOLS COMMON EXP; Zeng B, 2008, CAN J PLANT SCI, V88, P53; Zhang F, 2011, MOL BREEDING, V27, P11, DOI 10.1007/s11032-010-9409-1; Zhang F, 2011, EUPHYTICA, V177, P15, DOI 10.1007/s10681-010-0239-3; Zhang F, 2012, SCI HORTIC-AMSTERDAM, V141, P1, DOI 10.1016/j.scienta.2012.04.017
Number of Citaion: 41
Publication: MAIK NAUKA/INTERPERIODICA/SPRINGER
City of Publication: NEW YORK
Address of Publication: 233 SPRING ST, NEW YORK, NY 10013-1578 USA
ISSN: 1022-7954
29-Character Source Abbreviation: RUSS J GENET+
ISO Source Abbreviation: Russ. J. Genet.
Volume: 50
Version: 3
Start of File: 267
End of File: 273
DOI: 10.1134/S1022795414030132
Number of Pages: 7
Web of Science Category: Genetics & Heredity
Subject Category: Genetics & Heredity
Document Delivery Number: AE7EZ
Unique Article Identifier: WOS:000334160800006
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